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Most Recent Articles: BMC Bioinformatics

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Last updated about 6 hours ago

Sensitivity analysis on protein-protein interaction networks through deep graph networks

2 days ago

Protein-protein interaction networks (PPINs) provide a comprehensive view of the intricate biochemical...

py_ped_sim: a flexible forward pedigree and genetic simulator for complex family pedigree analysis

3 days ago

Large-scale family pedigrees are commonly used across medical, evolutionary, and forensic genetics...

Sculpting molecules in text-3D space: a flexible substructure aware framework for text-oriented molecular optimization

3 days ago

The integration of deep learning, particularly AI-Generated Content, with high-quality data derived...

Multi-proteins similarity-based sampling to select representative genomes from large databases

4 days ago

Genome sequence databases are growing exponentially, but with high redundancy and uneven...

M-DeepAssembly: enhanced DeepAssembly based on multi-objective multi-domain protein conformation sampling

5 days ago

Association and cooperation among structural domains play an important role in protein...

PathNetDRP: a novel biomarker discovery framework using pathway and protein–protein interaction networks for immune checkpoint inhibitor response prediction

5 days ago

Predicting immune checkpoint inhibitor (ICI) response remains a significant challenge in cancer...

Fast noisy long read alignment with multi-level parallelism

8 days ago

The advent of Single Molecule Real-Time (SMRT) sequencing has overcome many limitations...

M3S-GRPred: a novel ensemble learning approach for the interpretable prediction of glucocorticoid receptor antagonists using a multi-step stacking strategy

10 days ago

Accelerating drug discovery for glucocorticoid receptor (GR)-related disorders, including innovative machine learning...

A framework for predictive modeling of microbiome multi-omics data: latent interacting variable-effects (LIVE) modeling

11 days ago

The number and size of multi-omics datasets with paired measurements of the...

PtWAVE: a high-sensitive deconvolution software of sequencing trace for the detection of large indels in genome editing

11 days ago

Tracking of Insertions and DEletions (TIDE) analysis, which computationally deconvolves capillary sequencing...

PPI-Graphomer: enhanced protein-protein affinity prediction using pretrained and graph transformer models

11 days ago

Protein-protein interactions (PPIs) refer to the phenomenon of protein binding through various...

HPC-T-Assembly: a pipeline for de novo transcriptome assembly of large multi-specie datasets

12 days ago

Recent years have seen a substantial increase in RNA-seq data production, with...