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Bioinformatics Current Issue

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Last updated 7 days ago

Correction to: Finding antibodies in cryo-EM maps with CrAI

7 days ago

This is a correction to: Vincent Mallet, Chiara Rapisarda, Hervé Minoux, Maks...

Mapping the space of protein binding sites with sequence-based protein language models

10 days ago

AbstractMotivationBinding sites are the key interfaces that determine a protein’s biological activity...

NGPINT V3: a containerized orchestration Python software for discovery of next-generation protein–protein interactions

13 days ago

AbstractSummaryBatch yeast two-hybrid (Y2H) assays, leveraged with next-generation sequencing, have afforded successful...

The sequence kernel association test for the proportional odds model

14 days ago

AbstractMotivationThe Sequence Kernel Association Test (SKAT) and its extensions are the most...

SeuratIntegrate: an R package to facilitate the use of integration methods with Seurat

14 days ago

AbstractMotivationIntegrating multiple datasets has become an increasingly common task in scRNA-seq analysis...

GOBoost: leveraging long-tail gene ontology terms for accurate protein function prediction

14 days ago

AbstractMotivationWith the advancement of deep learning, researchers have increasingly proposed computational methods...

Correction to: Coding genomes with gapped pattern graph convolutional network

15 days ago

This is a correction to: Ruo Han Wang, Yen Kaow Ng, Xianglilan...

EDAmame: interactive exploratory data analyses with explainable models

17 days ago

AbstractSummaryComplex tabular datasets comprising many diverse features can require specific expertise to...

Securing diagonal integration of multimodal single-cell data against ambiguous mapping

23 days ago

AbstractMotivationRecent advances in single-cell multimodal omics technologies enable the exploration of cellular...

BAYAS: simplifying access to Bayesian analysis for biologists

24 days ago

AbstractMotivationIn biological research, complex and noisy biological systems with small effects are...

StripePy: fast and robust characterization of architectural stripes

24 days ago

AbstractMotivationArchitectural stripes in Hi-C and related data are crucial for gene regulation...